Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGLFDEISKDGLSPEYLLSRDYLEDDPEGFINFCHKRL-LFVDTKPNIVHDWIAKLER----NQQSLGVITQNIDGLHSDAGSQHVDELHGTLNRFYCNACHKSYTKSD---------------------VIDRTLKHCDN--CGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHF--KGDNLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
| 3RIY Chain:A ((8-273)) | -SSSMADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKW-----QAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRFRFHFQGPCGTTLPEALA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145091 for 1963 contacts (-73.9/contact) +
2D Compatibility (PS) -25524 + (NN) -9780 + (LL) 276
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -197119.0 ( -100.42 by residue)
QMean score : 0.504
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