Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDD-AKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
1ZAK Chain:A ((6-210))
LKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETL----EIRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEI----ASRLTQRFDDTEEKVKLRLETYYQNIESLLSTYEN--IIVKVQGDATVDAVFAKIDELLGS-
General information:
TITO was launched using:
RESULT:
Template:
1ZAK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48714 for 1500 contacts (-32.5/contact) +
2D Compatibility (PS) -21941 + (NN) -12534 + (LL) 636
1D Compatibility (HY) -16400 + (ID) 3850
Total energy: -102803.0 ( -68.54 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_1ZAK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZAK-query.scw
PDB file :
Tito_Scwrl_1ZAK.pdb
: