Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDFGI-TDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIAT----TTETYHADYIFVATGDYNF-PKKPF--K-YGIHYSE---IEDFD----NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTN-QDIKLTTHDESTRYPNIFMIGATVENDNAK------LCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 1NHP Chain:A ((1-317)) | ---MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS---FLSAGMQL----YLE---G-------------------KVKDVNSVRYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLD------KEFTDVLTEEMEAN-NITIATGETVERYEGDG-RVQKVVTDKNAYDA-DLVVVAVGVRPNTAW-LKGTLELHPNGLIKTDEYMR-TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPV------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NHP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162151 for 2402 contacts (-67.5/contact) +
2D Compatibility (PS) -32321 + (NN) -16752 + (LL) 3692
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -218582.0 ( -91.00 by residue)
QMean score : 0.399
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