Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTIKDIHALEVMDSRGNPTIQASVILSDNT----------KASAIVPSGASTGKREALELRDNDKTRFLGKGVLRACENVNSVIKHHLIGLEATNQAFVDERLRALDGTPNYANLGANAVLGVSMALARASAKALNLPLYRYLGGAN---ALTLPVPMLNIINGGTHANNSIDFQEYMIMPLGFESFKEALRASAEVYHT----LKKLLDEKNQLTSVGDEGGFAPNFNNNV----EPLEIISQAIEKAGYKLGEEIALALDVASSELVDEH-FNYHLKGE---NKILDSHELV-AYYKELVAKYPIVSIEDGLSEDDWEGWAFLSKELGRQIQLVGDDL-FVTNASILQKGIEKNVANAILIKPNQIGTISETLETIRLAKHHAYQCVISHRSGESEDSFIADFAVALNTGEIKTGSTARSERIAKYNRLLEIEHELKGG-IYIGKELFKHG |
| 2PTZ Chain:A ((3-429)) | HMTIQKVHGREVLDSRGNPTVEVEVTTEKGVFRSAVPSGASTGVYEACELRD-----------GDKKRYVGKGCLQAVKNVNEVIGPALIGRDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGTKELRLPVPCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQ--DAVNVGDEGGFAPPIKDINEPLPILMEAIEEA----GH--RGKFAICMDCAASETYDEKKQQYNLTFKSPEPTWVTAEQLRETYCK-WAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTVT-NTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWSVMVSHRSGETEDTYIADLVVALGSGQIKTGAPCRGERTAKLNQLLRIEEELGAHAKFGFPGWS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PTZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160452 for 3730 contacts (-43.0/contact) +
2D Compatibility (PS) -43513 + (NN) -22865 + (LL) 2080
1D Compatibility (HY) -30400 + (ID) 8900
Total energy: -264050.0 ( -70.79 by residue)
QMean score : 0.534
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