Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVVTITSGKGGVGKSTTTANLAIGLAESGKKVVAVDFDIGLRNLDMILGLENRIVYDVVDVMEKNCNLSQALITDKKTKNLSFLAASQSKDKNI-LDKEKVAILINALRADFDYILIDSPAGIESGFEHAILHADMALVVVTPEVSSLRDSDRVIGIIDAKSNRAKSGEEVHKHLIINRLKPELVANGEMISIEEVLKILCLPLIGIIPEDHHIISATNKGEPVIR-T-DCESAKAYQRITRRILGEEVEYVEFKAKRGFFSALKGIFS
1G3Q Chain:A ((1-236))
MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPD-VTLHDVLAGEANVEDAIYMT-QFDNVYVLPGAVDWEHVLKADPRKLPEVIKSLKDKFDFILIDCPAGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGL-------AILGFVLNRYGRSDRD----IPPEAAEDVMEVPLLAVIPEDPAIREGTLEGIPAVKYKPESKGAKAFVKLAEEIEKLA---------------------
General information:
TITO was launched using:
RESULT:
Template:
1G3Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171091 for 2180 contacts (-78.5/contact) +
2D Compatibility (PS) -24927 + (NN) -5343 + (LL) 2536
1D Compatibility (HY) -16800 + (ID) 3700
Total energy: -219325.0 ( -100.61 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_1G3Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3Q-query.scw
PDB file :
Tito_Scwrl_1G3Q.pdb
: