Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVRDIDKTTSLHLNNEAQFLCFRLDAEKDAQLYGMNIFKIREIIHYDGEVTEILGGSDGVMLGFLSVRGESIPLVDVKRWLHYNANDPSRDLKECSVKDDHNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEEGKLSAITRFDEQRVVQILDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQVGVVITDLEMPVISGFEVLKTIKADSRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKS-NILEIHEMLKKTLS |
2PL1 Chain:A ((3-115)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNE----HIPDIAIVDLGLPDEDGLSLIRRWRSND--VSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78078 for 854 contacts (-91.4/contact) +
2D Compatibility (PS) -12398 + (NN) -7870 + (LL) 14656
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: -86890.0 ( -101.74 by residue)
QMean score : 0.634
|
|
|