Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIKIAINGTGRIGLCAIRVASQRKDVEIVAINST-AELETLLHLIRHDSVHGHF--EAKLNANRTLNIGHSKNILVLSERDINKLDFSVANAEIIIECTGKFNSLEASSAHLKNSVKKVIISAPAQNAPTFVYGVNHTNYHN--ESVISNASCTTNATAPLLKILDEAFKVENALLTTIHSYTNDQNLLDTKH-KDIRRARAASLNLIPTSTGVSKAISLVLPHLGPKITGLAIRVPTPNVSLVDLSLNFKKVVSKASVQHALKDASKHAFKGIVSVDEERLVSSDFISSPFSAIVIDDQIMTIGEKNAKVLAWYDNEMGYSERLIDMAQYIAQN |
| 3H9E Chain:O ((6-337)) | RELTVGINGFGRIGRLVLRACMEK-GVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEF-RNGQLVVD-NHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYMFSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219522 for 2900 contacts (-75.7/contact) +
2D Compatibility (PS) -34357 + (NN) -5327 + (LL) 28
1D Compatibility (HY) -28800 + (ID) 5900
Total energy: -293878.0 ( -101.34 by residue)
QMean score : 0.457
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