Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPIKTYDIKEEELAKTAYATIKTNKGNITLELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGP---EHRIKCEVAHNPNKHQ-RGSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAESLSVLDKIKQGDIIESVVFSPSL
1ZKC Chain:A ((13-157))
----------GLVPRGSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFR-PNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGG--FDVLTAMENVESDPKTDRPKEE
General information:
TITO was launched using:
RESULT:
Template:
1ZKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75186 for 1033 contacts (-72.8/contact) +
2D Compatibility (PS) -15040 + (NN) -6204 + (LL) 856
1D Compatibility (HY) -8800 + (ID) 2650
Total energy: -107024.0 ( -103.61 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_1ZKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZKC-query.scw
PDB file :
Tito_Scwrl_1ZKC.pdb
: