Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MKAVVIENYGGKEELKEKEV--AMPKAGKNQVIVKEAATSINPIDWKLREGYLKQMMDWE------------FPIILGWDVAGVISEVGEGVTDWKVGDEVFARPETTRFGTYAEYTAVDDHLLAPLPEGISFDEAASIPLAGLTAWQALFDHAKLQ----KGEKVLIHAGAGGVGTLAIQLAKHAGAEVITTASAKNHELLKSLGADQVIDYKEVNFKDVLSD---IDVVFDTMGGQIETDSYDVLKEGT-GRLVSIVG----------------------ISNEDRAKEKNVTATGIWLQPNGEQLKELGKLLANKTIKPIVGATFPFSEKGVFDAHALSETHHAVGKIVISFNK |
2VN8 Chain:A ((18-375)) | LYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFP--FSKVPEAFLKVERGHARGKTVINVV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148499 for 2729 contacts (-54.4/contact) +
2D Compatibility (PS) -33618 + (NN) -8158 + (LL) 168
1D Compatibility (HY) -22000 + (ID) 5600
Total energy: -217707.0 ( -79.78 by residue)
QMean score : 0.565
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