Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEKENPDVTIEVSQMKES-PSSEATIQSAIAS-KTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSW-KFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDK--VLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFV-EDG--KLVADDKAGTELLTFMSELQKNKLLLA-S--------KATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPYSIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
| 1EU8 Chain:A ((3-406)) | ----------------------------------EGKIVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLDLVNALRGKSSDPDVFL-MDVAWLGQFIASGWLEPLDDYVQKDNYDLSVFFQSVINLADKQ-GGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVEMAQKIQSGERETNPNFWGFVWQGKQ-YEGLVCDFV-EYVYSNGGSLGEFKDGKWVPTLNKPENVEALQFMVDLIHKYKISPPNTYTEMTEEPVRLMFQQGNAAFERNWPYAWGLHNADDSPVK--GKVGVAPLPHFPGHK----SAATLGGWHIGISKYSDN--KALAWEFVKFVESYS-VQKGFAMNLGWNPGRVDVYDDPAVV---SKSPHLKELRAVFENAVPRPIVPYYPQLSEIIQK-YVNSALAGKISPQEALDKAQKEAEELVK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65773 for 3405 contacts (-19.3/contact) +
2D Compatibility (PS) -41136 + (NN) -11396 + (LL) 2472
1D Compatibility (HY) -14000 + (ID) 3900
Total energy: -133733.0 ( -39.28 by residue)
QMean score : 0.448
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