Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDERIISSETVDAEEVSFETSLRPQNLSQYIGQDKVKNNLTVFIEAATLRNEALDHVLLYGPPGLGKTTLAMVIASEMGSQIKTTSGPAIERPGDLATILTS------LEPGDVLFIDEIHRLSRAIEEILYPAMEDYCLDIVIGTGPTARSVRLDLPPFTLIGATTRA--GLLSAPLRDRFGVIDHLEFYTEEQLTEIVLRTSNI-------LDTKIDDLGAREIARRSRGTPRIANRLLKRVRDFAQVRGN--GTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTIIQSFRGGPVGLDTIAASIGEERETIEDMQEPYLLQIGFLQRTPRGRIVTETAYNHLGISYEKEV |
| 3PVS Chain:A ((14-256)) | ---------------QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIE--AGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSG-VKEIREAIERARQNRNAGRRTILFVDEVHRF------AFLPHIEDG--------------------TITFIGATTENPSFELNSALLSRAR-VYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80444 for 1515 contacts (-53.1/contact) +
2D Compatibility (PS) -22202 + (NN) -5690 + (LL) 9148
1D Compatibility (HY) -9200 + (ID) 3000
Total energy: -111388.0 ( -73.52 by residue)
QMean score : 0.468
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