Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILLIGASGTLGSAVKDRLEK-KAEVITAGRHSG-----------------DVTVDITSIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKL----------ESFFQGFVPVPAAKVARAFEKSVFGA---QTGESYKVY
3GAF Chain:A ((12-247))AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVS


General information:
TITO was launched using:
RESULT:

Template: 3GAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89231 for 1615 contacts (-55.3/contact) +
2D Compatibility (PS) -20840 + (NN) 542 + (LL) 52
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -117377.0 ( -72.68 by residue)
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_3GAF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GAF-query.scw
PDB file : Tito_Scwrl_3GAF.pdb: