Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRGMLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRDVVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGIEKGLSLKVGNVFSADRFYNDQLDK-QQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQTTFNDMIVVALEAAIK
1Z34 Chain:A ((2-234))
-TPHNSAQVGDFAETVLMCGDPLRAKLIAETYLENPKLVNNVRGIQGYTGTYKGKPISVMGHGMGLPSICIYAEELYSTYKVKTIIRVGTCGAIDMDIHTRDIVIFTSAGTNSKINRIRFMDHDYPATASFDVVCALVDAAKELNIPAKVGKGFSTDLFYNPQTELAQLMNKFHFLAVEMESAGLFPIADLYGARAGCICTVSDHILHHEE-----RQNSFQNMMKIALEAAIK
General information:
TITO was launched using:
RESULT:
Template:
1Z34.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165121 for 2024 contacts (-81.6/contact) +
2D Compatibility (PS) -23771 + (NN) -4193 + (LL) 584
1D Compatibility (HY) -21600 + (ID) 5800
Total energy: -219901.0 ( -108.65 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_1Z34.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z34-query.scw
PDB file :
Tito_Scwrl_1Z34.pdb
: