Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTT-------GKTLVMGRKTYESLG---KALPNRKTIVLTRDQGLKL---D-DAEILHSKEAVLALAE-------TGEPIYIVGGAEIYRLFMDVADQLIVTKIDAEFE-----ADTAFPEVDWE----------------NFSEVAKEF---H-------EKDEKNKYNYTFYTYERN |
3CSE Chain:A ((6-217)) | VVGIVAALLPEMGIGFQGNLPWRLAKEMKYFREVTTLTNDNSKQNVVIMGRKTWESIPQKFRPLPKRINVVVSRSFDGELRKVEDGIYHSNSLRNCLTALQSSLANENKIERIYIIGGGEIYRQSMDLADHWLITKIMPLPETTIPQMDTFLQKQELEQRFYDNSDKLVDFLPSSIQLEGRLTSQEWNGELVKGLPVQEKGYQFYFTLYTKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74661 for 1170 contacts (-63.8/contact) +
2D Compatibility (PS) -17108 + (NN) -2600 + (LL) 0
1D Compatibility (HY) -11600 + (ID) 2450
Total energy: -108419.0 ( -92.67 by residue)
QMean score : 0.484
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