Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDTMILNDNHKIPTLGLGTWMIN----NDRVAQVVKDAIELGYRHINTAQAYNNEKGVGVGIKES----GITRESLFVTTKIAAEHKNYESATKSIDQSLEALGLDCIDLMIIHSPQPWK-----------------------EWRETDKHFDQGNL
3BUV Chain:A ((6-163))
ASHRIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLV
General information:
TITO was launched using:
RESULT:
Template:
3BUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30207 for 900 contacts (-33.6/contact) +
2D Compatibility (PS) -13437 + (NN) -2560 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -57654.0 ( -64.06 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_3BUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BUV-query.scw
PDB file :
Tito_Scwrl_3BUV.pdb
: