Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIITDVYAREVLDSRGNPTLEVEVYTESGA----------FGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNVIAEAIIGYDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEVPLYSYLGGFN---TKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEALRWGAEVFHA----LKKILKERGLETAVGDEGGFAPKFEGTEDGVETILKAIEAAGYEAGENGIMIGFDCASSEFYDAERKVYDYSKFEGEGGAVRTAAEQI-DYLEELVNKYPIITIEDGMDENDWDGWKALTERLGGRVQLVGDDF-FVTNTDYLARGIKEEAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAQYKGIKSFYNLKK |
| 2PTZ Chain:A ((3-429)) | HMTIQKVHGREVLDSRGNPTVEVEVTTEKGVFRSAVPSGASTGVYEACELRD-----------GDKKRYVGKGCLQAVKNVNEVIGPALIGRDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGTKELRLPVPCFNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQ--DAVNVGDEGGFAPPIKDINEPLPILMEAIEEAG--HRG-KFAICMDCAASETYDEKKQQYNLTFKSP-EPTWVTAEQLRETYCKWA-HDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTV-TNTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWSVMVSHRSGETEDTYIADLVVALGSGQIKTGAPCRGERTAKLNQLLRIEEELGAHAKFGFPGWS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PTZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153043 for 3836 contacts (-39.9/contact) +
2D Compatibility (PS) -44578 + (NN) -22085 + (LL) 1484
1D Compatibility (HY) -28800 + (ID) 9750
Total energy: -256772.0 ( -66.94 by residue)
QMean score : 0.553
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