Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIHIEAKQGEIADKILLPGDPLRAKFIAENFLEDAVCFNTVRNMFGYTGTYKGHRVSVMGTGMGMPSISIYARELIVDYGVKTLIRVGTAGAINPDIHVRELVLAQAAATNSNIIRNDWPEFDFPQIADFKLLDKAYHIAKEMDITTHVGSVLSSDVFYSNQPDRNMALGKLGVHAIEMEAAALYYLAAQHNVNALAMMTISDNLNNPEEDTSAEERQTTFTDMMKVGLETLISE
1Z34 Chain:A ((2-234))
-TPHNSAQVGDFAETVLMCGDPLRAKLIAETYLENPKLVNNVRGIQGYTGTYKGKPISVMGHGMGLPSICIYAEELYSTYKVKTIIRVGTCGAIDMDIHTRDIVIFTSAGTNSKINRIRFMDHDYPATASFDVVCALVDAAKELNIPAKVGKGFSTDLFYNPQTELAQLMNKFHFLAVEMESAGLFPIADLYGARAGCICTVSDHILHH-EE-----RQNSFQNMMKIALEAAIKL
General information:
TITO was launched using:
RESULT:
Template:
1Z34.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161842 for 2042 contacts (-79.3/contact) +
2D Compatibility (PS) -24530 + (NN) -11255 + (LL) 688
1D Compatibility (HY) -20400 + (ID) 5150
Total energy: -222489.0 ( -108.96 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_1Z34.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z34-query.scw
PDB file :
Tito_Scwrl_1Z34.pdb
: