Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGIEFKNVSYTYQAGTPFEGRALFDVNLKIEDASYTAFIGHTGSGKSTIMQLLNGLHIPTKGEVIVDDFSIKAGDKNKEIKFIRQKVGLVFQFPESQLFEETVLKDVAFGPQNFGISQIEAERLAEEKLRLVGISEDLFDKNPFELSGGQMRRVAIAGILAMEPKVLVLDEPTAGLDPKGRKELMTLFKNLHKK-GMTIVLVTHLMDDVADYADYVYVLEAGKVTLSGQPKQIF-----QEVELLESKQLGVPKITKFAQRLSHKGLNLPSLPITINEFVEAIKHG---------------------------------------------------------- |
3TUZ Chain:H ((23-362)) | HMIKLSNITKVFHQGTRTI-QALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTT-LSESELTKARRQIGMIFQHF-NLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDK-HDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137536 for 2061 contacts (-66.7/contact) +
2D Compatibility (PS) -30402 + (NN) -16307 + (LL) -64
1D Compatibility (HY) -17200 + (ID) 4100
Total energy: -205609.0 ( -99.76 by residue)
QMean score : 0.535
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