Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFFRMLKEDIDTVFDQDPAARSYFEVILTYSGLHAIWAHRIAHALYKRKFYFLARLISQVSRFFTGIEIHPGATIGRRFFIDHGMGVVIGETCEIGNNVTVFQGVTLGGTGKEKGKRHPTIKDDALIATGAKVLGSITVGEGSKIGAGSVVLHDVPDFSTVVGIPGRVVVQNGKKVRRDLNHQDLPDPVADRFKSLEQQILELKAELEDRKERINQK
4H7O Chain:A ((80-250))
----AAACDICATVNRDPAVSMYSMPLLYLKGYHALQGYRVANWLWRQGRKALATYFQNQISVACQVDIHPAARIGRGIMLDHATGIVIGETAVVEDDVSILQDVTLGGTGKECGDRHPKIREGVMIGAGAKILGNIEVGEGAKIGSGSVVLQAVPPHTTVAGVPARIVGRPQSD------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4H7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124051 for 1409 contacts (-88.0/contact) +
2D Compatibility (PS) -18405 + (NN) -5621 + (LL) 3792
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -159935.0 ( -113.51 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_4H7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H7O-query.scw
PDB file :
Tito_Scwrl_4H7O.pdb
: