Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYGDSREKILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPGGKEQLAIEAVNEMKEYIRQKIADCMEA-CTDPAEGIQAFLKELSCQFSCTEDIEGLPVGLLAAETSLKSEPLREACHEAYKEWASVYEEKLRQTGCSESRAKEASTVVNAMIEGGILLSLTAKNSTPLLHISSCIPDLLKR
3ON4 Chain:A ((7-186))-NISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFP-SKEDLGVAVISWHTDKIAAVLSDISNNSSLSAKEKIQKFFDAILTLTYNSE-NKMCLGGMFASDFQSLPVSIQNQAKKFFELIIEWLKGVLETNGYDNESSLSLAKQIISLVEGGLLLARLYGDETFLEGVRHFI------


General information:
TITO was launched using:
RESULT:

Template: 3ON4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 695 -93958 -135.19 -524.91
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -135.19
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_3ON4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ON4-query.scw
PDB file : Tito_Scwrl_3ON4.pdb: