Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNS-EVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQ------------EDGTIGHAYGFQLGKKNRSL-------NGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV
3QG2 Chain:A ((322-608))-YHPEYQYLNIIYDIMMNGNKQS--DRT-GV-----G--VLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLWFIRGET-NGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMYDNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLNRIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMAA


General information:
TITO was launched using:
RESULT:

Template: 3QG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1292 -13550 -10.49 -50.75
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -10.49
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_3QG2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QG2-query.scw
PDB file : Tito_Scwrl_3QG2.pdb: