Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGTVNITVSDGVRYAVADEGPNASEAVVCLHGFTGSKQSWT-FLD-EMLPDSRLIKIDCLGHGETDAPLNGKRYSTTRQVSDLAEIFDQLKLHKVKLIGYSMGGRLAYSFAMTYPERVSALVLESTTPGLKTLGERRERIMRDRKLADFILRDGLEAFVAYWENIPLFSSQQRLAEDIRYRIRSG---RLRNNKIGLANSLTGMGTGSQPSLWSRVEEIDVPVLLICGEWDEKFC-AINQEVHKMLPSSRIEIVPKAGHTVHVEQPRLFGKIVSEFLTSI
4PW0 Chain:A ((21-283))--------VNGTRYAYRSLGAPSDIPLICFQHFTGTLDNWDPLITNGLSKGRQLIIFDNKGVGLSSGTT---PDNVAAMTADALEFITALGIRYFDVLGFSLGGFIVQYMAHIQPDMIRKIIIVGAAPQGVKVLHTFPDLIA--RAMQL---EPKERFLFIFFEQSEHSRSKGLATLG-RLYERTTDRDQDASAQAIGAQLTAITNWGKKTPSFEITSIQHPVFVVQGSNDEMMDTYNSYELFKQLPDAILSLYPDAAHGSFYQYPELFVSQTEYFLDSY


General information:
TITO was launched using:
RESULT:

Template: 4PW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1470 -14545 -9.89 -56.59
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -9.89
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_4PW0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PW0-query.scw
PDB file : Tito_Scwrl_4PW0.pdb: