Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGDLSISQVSARPGRIGIRARQMFDGYR-----FQRGPVLVVVEDGRISAVDFAGSA---C-PDMNLVDLGESTLLPGLVDAHAHLCWDPDGRP--------EDLAGD-----------------PHAVLVGRARRHAAAALRSGITTIRDLGDRDYA---A-LALREEYRQKTTVGPELVVSGPPLTRSGGHCWFLGGVADSVEE-LVDAVQERAARGADWIKVMATGGFVTTASDPWQPQYGSGQLAAVVAAAEQVGLPVTAHAHATA---GIAAAVAAGVDGIEHCTFLSEGSAAASPDVVEAIVAQGVWCGMTIPRVYPEMPENLVAVVQDGWRNIRRLIDAGARVALSTDAGVAPGRRHDVLPDDLVYLS-RHGFTSTEVLTGATAAAAASCGLGHRKGRIAPGYDADLLAVAAGVDHDPAG---LCDVKAVWRSGTQVPLQASAVGYNTPS |
2PUZ Chain:A ((15-418)) | -------------ATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGNRAMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLRVARRLETLRPVRIVTSYLAAHATPADYK--GRNADYITDVVLPGLEKAHAEG--LADAVD--GF------CEGIAFSVKEIDRVFAAAQQRGLPVKLHAEQLSNLGGAELAASYNALSADHLEYLDE-------TGAKALAKAGTVAVLLPGAFYA--------LREKQLPPVQALRDAGAEIALATDCNPGT-SPLTSLLLTMNMGATLFRMTVEECLTATTRNAAKALGLLAETGTLEAGKSADFAIWDIERPAELVYRIGFNPLHARIFKGQKVS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206841 for 3328 contacts (-62.2/contact) +
2D Compatibility (PS) -39522 + (NN) -20973 + (LL) 2336
1D Compatibility (HY) -9200 + (ID) 4000
Total energy: -278200.0 ( -83.59 by residue)
QMean score : 0.447
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