Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAGGPLP
1B9B Chain:A ((2-251))-TRKLILAGNWKMHKTISEAKKFVSLLVNELH--DVKEFEIVVCPPFTALSEVGEILS--GRNIKLGAQNVFYEDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLKE-SFIELARIMR-----


General information:
TITO was launched using:
RESULT:

Template: 1B9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -184488 for 2137 contacts (-86.3/contact) +
2D Compatibility (PS) -27917 + (NN) -17634 + (LL) -396
1D Compatibility (HY) -24000 + (ID) 5500
Total energy: -259935.0 ( -121.64 by residue)
QMean score : 0.604

(partial model without unconserved sides chains):
PDB file : Tito_1B9B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1B9B-query.scw
PDB file : Tito_Scwrl_1B9B.pdb: