Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPG-----YQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDS-KLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD |
3BKP Chain:A ((21-191)) | -------------------------------------------------------------------------------------------------------------------------------------------RGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVK---DFIVQGGDPTGTGRGGADTTFDGKPFDVETHPR-----------LKFRYRGLVGVANLG--TNGNQFFITLARADVLNNAYTLFGKVTGHTLYNLMKFNDLEVG---KEDRPMTPPFIKSVDV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84008 for 1183 contacts (-71.0/contact) +
2D Compatibility (PS) -16218 + (NN) -10665 + (LL) 7572
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -115269.0 ( -97.44 by residue)
QMean score : 0.508
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