Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPREHGKRSIDNETRSAL----KRQRPAVIWLTGLSGAGKSTIASALELALFEQKKHTFLLDGDDLRLGLCRNLGYSDEDRTENIRRIAEVAKILLEAGLIVIVATISPFSRDRRLSRELIG--IEHFIEVFVDTPLSECERRDPKGLYRKARSGKIENFTGIDSIYETPAQPNITIDTLSEDPDLAVKRIISYLETNQPA
1X6V Chain:B ((34-224))
---------HVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARA----GFTGIDSEYEKPEAPELVLKTDSCDVNDCVQQVVELLQERDIV
General information:
TITO was launched using:
RESULT:
Template:
1X6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98898 for 1396 contacts (-70.8/contact) +
2D Compatibility (PS) -20133 + (NN) -11459 + (LL) 428
1D Compatibility (HY) -13600 + (ID) 4250
Total energy: -147912.0 ( -105.95 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_1X6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X6V-query.scw
PDB file :
Tito_Scwrl_1X6V.pdb
: