Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MGRSSRKDEILQAALACFSEHGVDATTIEMIRDRSGASIGSLYHHFGNKERIHGELYLAGIGQYAALLEAGFARA-RSAEETVRLLVTSYIDWVVANPDWARFILHSRGRVEA----GELGERLRADNQAHFARIHAALAGYRAEGLFR-EMPDDCFASVVIGPAHDLARQWLAGRTRVALADCRELLAQVAWDSVRAA-----
2UXU Chain:A ((5-210))
TKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK
General information:
TITO was launched using:
RESULT:
Template:
2UXU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99590 for 1404 contacts (-70.9/contact) +
2D Compatibility (PS) -21015 + (NN) -10692 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 2050
Total energy: -138147.0 ( -98.40 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_2UXU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UXU-query.scw
PDB file :
Tito_Scwrl_2UXU.pdb
: