Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLCLRASFWLALVGCVISDNPERYSTNLSNHVDDFTTFRGTELSFLVTTHQPTNLVLPSNGSMHNYCPQQTKITSAFKYINTVISCTIFIVGMVGNATLLRIIYQNKCMRNGPNAL---IASLALGDLIYVVIDLPINVFKLLAGRWPFDHNDFGVFLCKLFPFLQKSSVGITVLNLCALSVDRYRAVASWSRVQGIGIPLVTAIEIVSIWILSFILAIPEAIGFVMVPFEYRGEQHK--TCMLNATSKFMEFYQDVKDWWLFGFYFCMPLVCTAIFYTLMTCE---MLNRRNGSLRIALSE-HLKQRREVAKTVFCLVVIFALCWFPLHLSRILKKTVYNEMDKNRCELLSFLLLMDYIGINLATMNSCINPIALYFVSKKFKNCFQSCLCCCCYQSKSLMTSVPMNGTSIQWKNHDQNNHNTDRSSHKDSMN |
| 3ZEV Chain:A ((19-325)) | -------------------------------------------------------------------------------KVLVTAIYLALFVVGTVGNSVTLFTLARKK---SLQSTVDYYLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAG---CRGYYFLRDACTYATALNVVSLSVELYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNLSGDGTHPGGLVCTPIVDTATLKVVIQVNTFMSFLF----PMLVASILNTVIANKLTVMVHQ----------PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDE--QWTTFLFDFYHYFYMLTNALVYVSAAINPILYNLVSANFRQVFLSTLAC----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177382 for 2078 contacts (-85.4/contact) +
2D Compatibility (PS) -28791 + (NN) -2739 + (LL) 8004
1D Compatibility (HY) -25200 + (ID) 3650
Total energy: -229758.0 ( -110.57 by residue)
QMean score : 0.211
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