Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLPDWKSSLILMAYIIIFLTGLPANLLALRAFVGRIRQPQPAPVHILLLSLTLADLLLLLLLPFKIIEAASNFRWYLPKVVCALTSFGFYSSI--YCSTWLLAGISIERYLGVAFPV-QYKLSRRPLYGVIAALVAWVMSFGHCTIVIIV---QYLNTTEQVRSGNEITCYENFTDNQLDVVLPVRLELCLVLFFIPMAVTIFCYWRFVWIMLS-----QPLVGAQRRRRAVG-LAVVTLLNFLVCFGPY-NVSHLVGYHQRKS--PWWRSIAVVFSSLNASLDPLLFYFSSSVVRRAFGRGLQVLRNQGSSLLGRRGKDTAEGTNEDRGVGQGEGMPSSDFTTE |
3DQB Chain:A ((35-326)) | ----WQFSMLAAYMFLLIMLGFPINFLTL--YVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLE--GFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGEN--HAIMGVAFTWVMALA-CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIY-----MFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYI----MMNKQFRNCMVTTLCCGKN--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243225 for 2170 contacts (-112.1/contact) +
2D Compatibility (PS) -28073 + (NN) -8596 + (LL) 1504
1D Compatibility (HY) -30800 + (ID) 3250
Total energy: -312440.0 ( -143.98 by residue)
QMean score : 0.272
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