Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPECARAAGDAPLRSLEQANRTRFPFFSDVKGDHRLVLAAVETTVLVLIFAVSLLGNVCALVLVARRRRRGATACLVLNLFCADLLFI-SAIPLVLAVRWTEAWLLGPVACHLLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYS-AVAALPLCVFFRVVPQRLPGADQEISICTLIWPTIPGEISWDVSFV----TLNFLVPGLVIVISYSKILQTSEHLLDARAVVTHSEITKASRKRLTVSLAYSESHQIRVSQQDFRLFRTLFLLMVSFFIMWSPIIITILLILIQNFKQDLVIWPSLFFWVVAFTFANSAL-NPILYNM--TLCRNEWKKIFCCFWFPEKGAILTDTSVKRNDLSIISG |
| 3PQR Chain:A ((39-326)) | -------------------------------------MLAAYMFLLIMLGFPINFL---TLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF-GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCS------CGIDYYT-PHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVK---EAAAQQQESATTQKAEKEVT---------------------RMVIIMVIAFLICWLPYAGVAFYI----FTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -261825 for 2137 contacts (-122.5/contact) +
2D Compatibility (PS) -28964 + (NN) -14808 + (LL) 6176
1D Compatibility (HY) -28400 + (ID) 3850
Total energy: -331671.0 ( -155.20 by residue)
QMean score : 0.218
|
|
|