Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADAQNISLDSPGSVGAVAVPVVFALIFLLGTVGNGLVLAVLLQPGPSAWQEPGSTTDLFILNLAVADLCFILCCVPFQATIYTLDAWLFGALVCKAVHLLIYLTMYASSFTLAAVSVDRYLAVRHPLRSRALRTPRNARAAVGLVWLLAALFS-APYLSYYGTVRYGALELCVPAWED------ARRRALDVATFAAGYLLPVAVVSLAYGRTLRFLWAAVGPAGAAAAEARRRAT----GRAGRAMLAVAALYALCWGPHHALILCFWYGRFAFSPATYACRLASHCLAYANSCLNPLVYALASRHFRARFRRLWPCGRRRRHRARRALRRVRPASSGPPGCPGDARPSGRLLAGGGQGPEPREGPVHGGEAARGPE |
| 2Y03 Chain:A ((14-300)) | -------------------MSLLMALVVLLIVAGNVLVIAAI---GST--QRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKC---YQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLF---VAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212332 for 1952 contacts (-108.8/contact) +
2D Compatibility (PS) -28205 + (NN) -16092 + (LL) 3152
1D Compatibility (HY) -27600 + (ID) 4100
Total energy: -285177.0 ( -146.09 by residue)
QMean score : 0.291
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