Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELLKLNRSVQGTGPGPGASLCRPGAPLLNSSSVGNLSCEPPRIRGAGTRELELAIRITLYAVIFLMSVGGNMLIIVVLGLSRRLRTVTNAFLLSLAVSDLLLAVACMPFTLLPNLMGTFIFGTVICKAVSYLMGVSVSVSTLSLVAIALERYSAICRPLQARVWQTRSHAARVIVATWLLSGLLMVPYPVYTVVQPVGPRVLQCVHRWPSARVR-----QTWSVLLLLLLFFIPGVVMAVAYGLISRELYLGLRFDGDSDSDSQSRVRNQGGLPGAVHQNGRCRPETGAVGEDSDGCYVQLPRSRPALELTALTAPGPGSGSRPTQAKLLAKKRVVRMLLVIVVLFFLCWLP---VYSANTWRAFDG----PGAHRALSGAPISFIHLLSYASACVNPLVYCFMHRRFRQACLETCARCCPRPPRARPRALPDEDPPTPSIASLSRLSYTTISTLGPG |
| 4MBS Chain:A ((21-362)) | -------------------------------------PCQKINVKQIAARLLP-----PLYSLVFIFGFVGNMLVILILINYKRLKSMTDIYLLNLAISDLFFLLT-VPF-WAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPNIIFTRSQKEGLH-YTCSSHFPYSQYQFWKNFQTLKIVILGLV--LPLLVMVICYSGILKTL---LRMK-----------KYTCTVCGYIYNPEDGDPDNG-VNPGTDF------KDIPDDWVCPLCGVGKDQFEEVEEEK--KRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVT--ETLGMTHCCINPIIYAFVGEEFRNYLLVFFQ----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233785 for 2401 contacts (-97.4/contact) +
2D Compatibility (PS) -34078 + (NN) -16880 + (LL) 4880
1D Compatibility (HY) -34000 + (ID) 4300
Total energy: -318163.0 ( -132.51 by residue)
QMean score : 0.255
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