Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTTMEADLGATGHRPRTELDDEDSYPQGGWDTVFLVALLLLGLPANGLMAWLAGSQARHGAGTRLALLLLSLALSDFLFLAAAAFQILEIRHGGHWPLGTAACRFYYFLW-GVSYSSGLFLLAALSLDRCLLALCPHWYPGHRPV---RLPLWVCAGVWVLATLFSVPWLVFPEAAVWWYDL-----VICLDFWDSEELSLRMLEVLGGFLPFLL-LLVCHVLTQATAC--------RTCHRQQQPAACRGFARVARTILSAYVVLRLPYQLAQLLY--------LAFLWDVYS-GYLLWEALVYSDYLILLNSCLSPFLCLMASADLRTLLRSVLSSFAAALCEERPGSFTPTEPQTQLDSEGPTLPEPMAEAQSQMDPVAQPQVNPTLQPRSDPTAQPQLNPTAQPQSDPTAQPQLNLMAQPQSDSVAQPQADTNVQTPAPAASSVPSPCDEASPTPSSHPTPGALEDPATPPASEGESPSSTPPEAAPGAGPT |
| 3ZEV Chain:A ((90-325)) | ------------------------------------------------------------------------------------------------WAFGDAGCRGYYFLRDACTYATALNVVS-LSVE-LYLAIC-HPFKAKTLMSRSRTKKFISA-IWLASALLAIPMLFTMGLQNLSGDGTHPGGLVCTPIVDTA--TLKVVIQVNTFMSFLFPMLVASILNTVIANKLTVMVHQ-----PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALVY------VSAAINPILYNLVSANFRQVFLSTL----AC---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159464 for 1250 contacts (-127.6/contact) +
2D Compatibility (PS) -21001 + (NN) -13322 + (LL) 11044
1D Compatibility (HY) -25600 + (ID) 3150
Total energy: -211493.0 ( -169.19 by residue)
QMean score : 0.172
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