Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRSWWAGSRKPPREMLKLSGSDSSQSMNGLEVAPPGLITNFSLATAEQCGQETPLENMLFASFYLLDFILALVGNTLALWLFIRDHKSGTPANVFLMHLAVADLSCVLVLPTRLVYHFSGNHWPFGEIACRLTGFLFYLNMYASIYFLTCISADRFLAIVHPVKSLKLRRPLYAHLACAFLWVVVAVAMAPLLVS-----PQTVQTNHTVVCLQLYREKASHHALVSL-AVAFTFPFITTVTCYLLIIRSLRQGLRVEKRLKT------KAVRMIAIVLAIFLVCFVPYHVNRSVYVLHYRSHGASCATQRILALANRITSCLTSLNGALDPIMYFFVAEKFRHALCNLL-CGKRLKGPPPSFEGKTNESSLSAKSEL |
| 3C9M Chain:A ((34-327)) | -------------------------------------------------------PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGEN-HAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPY-AGVAFYIF---THQGSCFGPIFMT----IPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -347521 for 2462 contacts (-141.2/contact) +
2D Compatibility (PS) -28235 + (NN) -6479 + (LL) 3488
1D Compatibility (HY) -29600 + (ID) 3550
Total energy: -411897.0 ( -167.30 by residue)
QMean score : 0.284
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