Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATSIYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSL-CTLVECLYFVSMYGSVFTICFISMDRFLAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAKVFFPLEVF--GFLLPMGIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFLPVHLGFFLQFLVRNSFI-VECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIRAHRPSRVQLVLQDTTISRG |
4XT1 Chain:A ((25-310)) | ---DEDATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVI--FTITWRRRIQ--CSGDVYFINLAAADLLFVCTLPLWMQYLLD-----SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY----MRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDN-QCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSR-----HKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278291 for 2022 contacts (-137.6/contact) +
2D Compatibility (PS) -28187 + (NN) -7110 + (LL) 2248
1D Compatibility (HY) -34400 + (ID) 3600
Total energy: -349340.0 ( -172.77 by residue)
QMean score : 0.288
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