Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYRFTDFDVSNISIYLNHVLFYTTQQAGDLEHMETRNYSAMTEFFLVGLSQYPELQLFLFLLCLIMYMIILLGNSLLIIITILDSRLHTPMYFFLGNLSFLDICYTSSSIPPMLIIFMSERKSISFIGCALQMVVSLGLGSTECVLLAVMAYDHYVAICNPL---RYS---IIMNGVLYVQMAAWSWIIGCLTSLLQTVLTMMLPFCGNNVIDHITCEILALLKLVCSDITINVLIMTVTNIVSLVILLLLIFISYVFILSSILRINCAEGRKKAFSTCSAHS-------IVVILF------YGSALFMYMKPKSKNTNTSDEIIGLSYGVVSPMLNPIIYSLRNKEVKEAVKKVLSRHLHLLKM |
3DQB Chain:A ((21-314)) | -----------------------------------RSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPI----NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIM-GVAFTWVMALACAAPPLVGWSRYIPEGMQCSCG---IDYYTPH----------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKE--AAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281706 for 2192 contacts (-128.5/contact) +
2D Compatibility (PS) -27830 + (NN) -7089 + (LL) 5080
1D Compatibility (HY) -21200 + (ID) 3400
Total energy: -336145.0 ( -153.35 by residue)
QMean score : 0.209
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