Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLGSLGNSSSSVSATFLLSGIPGLERMHIWISIPLCFMYLVSIPGNCTILFIIKTERSLHEPMYLFLSMLALIDLGLSLCTLPTVLGIFWVGAREISHDACFAQLFFIHCFSFLES-------SVLLSMAFDRFVAICHPLHYVSILTNTVIGRIGLVSLGRSVALIFPLPFMLKRFPYCGSPVLSHSYCLHQEVMKLACADMKANSIYGMFVIVSTVGIDSLLILFSYALILRTV------LSIASRAERF------KALNTCVSHICAVLLFYTPMIGLSVIHRFGKQ-APHLVQVVMGFMYLLFP-PVMNPIVYSVKTKQIRDRVTHAFCY |
| 2YCW Chain:A ((14-283)) | -------------------------------MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRAR-AKVIICTVWAISALVSFLPIMMHWWRDEDPQALK---CYQDP----GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFV--AFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212109 for 1760 contacts (-120.5/contact) +
2D Compatibility (PS) -24312 + (NN) 947 + (LL) 3640
1D Compatibility (HY) -26800 + (ID) 3100
Total energy: -261734.0 ( -148.71 by residue)
QMean score : 0.163
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