Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAANESSEGISFVLLGLTTSPGQQRPLFVLFLLLYVASLLGNGLIVAAIQASPALHAPMYFLLAHLSFADLCFASVTVPKMLANLLAHDHSISLAGCLTQMYFFF-ALGVTDSC-LLAAMAYDCYVAIRHPLPYATRMSRAMCAALVGMAWLVSHVHSLLYILLMARLSFCASHQVPHFFCDHQPLLRLSCSDTHHIQLLIFTEGAAVVVT------PFLLI----LASYGAIAAAVLQLPSASGRLR--------AVSTCGSHLAVVSLFYGTVIAVYFQATSRRE--AEWGRVATVMYTVVTPMLNPIIYSLWNRDVQGALRALLIGRRISASDS |
2YCY Chain:A ((17-297)) | ---------------------------LMALVVLLIVA---GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDP-QALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR--DRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCR-SPDFRKAFKRLLAF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240900 for 1833 contacts (-131.4/contact) +
2D Compatibility (PS) -26254 + (NN) -9327 + (LL) 4188
1D Compatibility (HY) -27200 + (ID) 3700
Total energy: -303193.0 ( -165.41 by residue)
QMean score : 0.201
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