Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNQSSTPGFLLLGFSEHPGLERTLFVVVLTSYLLTLVG---NTLIILLSALDPKLHSPMYFFLSNLSFLDL-----CFTTSCVPQML-VNLWGPKKTISFLDCSVQIFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCWQLASVAWVIGLVESVVQTPSTLHLPFCPDRQVDDFVCEVPALIRLSC-------EDTSYNEIQVAVASVFILVVPLSLILVSYGAITWAVLRINSAKGRRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYA-------QERGKFFG-------LFYAVGTPSLNPLIYTLRNKEVTRAFRRLLGKEMGLTQS |
| 3PXO Chain:A ((45-312)) | --------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT------GCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVA-FTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQL---VFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154002 for 1663 contacts (-92.6/contact) +
2D Compatibility (PS) -24151 + (NN) -3496 + (LL) 4384
1D Compatibility (HY) -23200 + (ID) 3350
Total energy: -203815.0 ( -122.56 by residue)
QMean score : 0.223
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