Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAWENQTFNSDFLLLGIFNHSPTHTFLFFLVLAIFSVAFMGNSIMVLLIYLDTQLHTPMYFLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYISLLGSECFLLAVMSYDRYTAICHPLRYTNLMRPKICGLMTAFSWILGSTDGIIDAVATFSFSYCGSREIAHFCCDFPSLLILSCNDTSI---FEEVI---------FICCIVMLVFPVAIIITSYARVILA----VIHMGS-GEGRR----KAFTTCSSHLMVVGMYYGAGL---------FMCIQPTSHHSPMQDKMVSVFYTIVTPMLNPLIYSLRNKEVTRALMKILGKGKSGD |
| 2YDV Chain:A ((14-303)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAI--AISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTP---MLGWNNCGQPKEGKAHSQ-------GCGEGQVACLFEDVVPMNYMVYFNFFACVLV---PLLLMLGVYLRIFLAARRQLKQMESQ-----STLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFC--PDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233386 for 1879 contacts (-124.2/contact) +
2D Compatibility (PS) -25973 + (NN) -7474 + (LL) 4372
1D Compatibility (HY) -25200 + (ID) 3250
Total energy: -290911.0 ( -154.82 by residue)
QMean score : 0.225
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