Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQSNYSSLHGFILLGFSNHPKMEMILSGVVAIFYLITLVG---NTAIILASLLDSQLHTPMYFFLRNLSFLDL-----CFTTSIIPQML-VNLWGPDKTISYVGCIIQLYVYMWLGSVECLLLAVMSYDRFTAICKPLHYFVVMNPHLCLKMIIMIWSISLANSVVLCTLTLNLPTCGNNILDHFLCELPALVKIACV-------DTTTVEMSVFALGIIIVLTPLILILISYGYIAKAVLRTKSKASQRKAMNTCGSHLTVVSM--------------FYGTIIYMYLQPGNRASKDQGK-FLTL--FYTVITPSLNPLIYTLRNKDMKDALKKLMRFHHKSTKIKRNCKS |
| 1HZX Chain:A ((40-318)) | --------------------------FSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGP------TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG-VAFTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTV--KEAAA-----ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS----DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDSTTVSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211408 for 1790 contacts (-118.1/contact) +
2D Compatibility (PS) -23603 + (NN) 2360 + (LL) 3904
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -232997.0 ( -130.17 by residue)
QMean score : 0.206
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