Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFYHVGQAAFELLTSSFILVGFSDRPHLELIVFVVVLIFYLLTLLG---NMTIVLLSALDSRLHTPMYFFLANLSFLDMCFTTGSIPQMLYN------LWGPDKTISYVGCAIQLYFVLALGGVECVLLAVMAYDRYAAVCKPLHYTIIMHPRLCGQLASVAWLSGFGNSLIMAPQTLMLPRCGHRRVDHFLCEMPALIGMAC-------VDTMMLEALAFALAIFII--LAPLILILISYGYVGGTVLRIKSAAGRK----KAFNTCSSHLIVVSL--------FYGTIIYMYLQPANTYSQDQGKFLTL--FYTIVTPSVNPLIYTLRNKDVKEAMKKVLGKGSAEI |
| 1HZX Chain:A ((48-326)) | ----------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGP------TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRFGENHA----IMGVAFTWVMALACAAPPLVGWSR---YIPE-----GMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQL---VFTVKEAAA--ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGP---IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -208363 for 1812 contacts (-115.0/contact) +
2D Compatibility (PS) -24040 + (NN) 945 + (LL) 5980
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -229278.0 ( -126.53 by residue)
QMean score : 0.187
|
|
|