Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKKKNVTEFILIGLTQNPIMEKVTFVVFLVLYMITLSGNLLIVVTITTS-QALSSPMYFFLTHLSLIDTVYSSSSAPKLIVDSFQEKKIISFN--GCMAQAYAEHIFGATEIILLTVMACDCYVAICKPLNYTTIMSHSLCILLVAVAWVGGFLHATIQILFTVWLPFCGPNVIGHFMCDLYPLLKLVC---IDTHTLGLFVAVNSGFICLLNFLILVVS----------YVIILRSLKNNSLE-GRCKALSTCISHIIVVVLFFVPCIFVYLRSVTTLPIDKAVAVFYTMVVPMLNPVVYTLRNAEVKSAIRKLWRKKVTSDND |
4BUO Chain:A ((24-260)) | ---------------------------IYLALFVVGTVGNSVTLFTLARKK-SLQSTVDYYLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVVSLSVELYLAICHPFKAKTLMSRSRTKKFISAIWLASALLA-IPMLFTMGL----QNLSG----DGTHPGGLVCTPIVDTATLKVVIQVNT-FMSFL-FPMLVASILNTVIANKLTVMVHQ--------PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALVYVSAAINPILYNLVSANFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221453 for 1419 contacts (-156.1/contact) +
2D Compatibility (PS) -20745 + (NN) -1002 + (LL) 3132
1D Compatibility (HY) -19600 + (ID) 3050
Total energy: -262718.0 ( -185.14 by residue)
QMean score : 0.167
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