Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMSFLHIVFSILVVVAFILGNFANGFIALINFIAWVKRQKISSADQIIAALAVSRVGLLWVI-LLHWYSTVLNPT-SSNLKVIIFISNAWAVTNHFSIWLATSLSIFYLLKIVNFSRLIFHHLKRKAKSVVLVIVLGSLFFLVCHLVMKHTYINVWTEECEGNVTWKIKLR---NAMHLSNLTVAMLANLIPFTLTLISFLLLIYSLCKHLKKMQLHGK-------GSQDPSTKIHIKALQTVTSFLILLAIYFLCLII----SFWNFKMRPKEIVLMLCQAFGIIYPSFHSFILIWGNKTLKQTFLSVLWQVTCWAKGQNQSTP |
2Z73 Chain:A ((33-336)) | ----VYYSLGIFIGICGIIGCGGNGIVIYLFTKTK---SLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG---RPMA-ASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAY-TLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251716 for 2294 contacts (-109.7/contact) +
2D Compatibility (PS) -29225 + (NN) -9457 + (LL) 996
1D Compatibility (HY) -11600 + (ID) 1550
Total energy: -302552.0 ( -131.89 by residue)
QMean score : 0.312
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