Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGDHMVLGSSVTDKKAIILVTILLLLRLVAIAGNGFITAALGVEWVLRRMLLPCDKLLVSLGASRFCLQSVV-MGKTIYVFLHPMAFPYNPVLQFLAFQWDFLNAATLWSSTWLSVFYCVKIAT-FTHPVFFWLKHKLSGWLPWMLFSSVGLSSFTTILFFIGNHRMYQNYLRNHLQPWNVTGDSIRS-----YCEKFYLFPLKMITWTMPTAVFFICMILLITSLGRHRKKALLTTS-------GFREPSVQAHIKALLALLSFAMLFISYFLSLVFS-AAGIF----PPLDFKFWVWESVIYLCAAVHPIILLFSNCRLRAVLKSRRSSRCGTP |
2Z73 Chain:A ((32-332)) | --------------AVYYSLGIFIGICGIIGCGGNGIVIYLFTKT---KSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKM--SHRRA---FIMIIFVWLWSVLWAIGPIFGWGA-------YTLE--GVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCC |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230760 for 2260 contacts (-102.1/contact) +
2D Compatibility (PS) -29114 + (NN) -11055 + (LL) 2180
1D Compatibility (HY) -12400 + (ID) 1650
Total energy: -282799.0 ( -125.13 by residue)
QMean score : 0.272
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