Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILVSLDF-FGSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIISP-S-IFSLAKLKHPSASHILGFFLFSWVLNMFIGVIF-CCTLRLPPVKRGQSSVCHTALFLFAHELH-PQ----E---TVFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIR-GY--LSAF----------TQPACPRVSPVKRASQAIL-LLVSFVFTYWVDFTFSFSGGVTW--INDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 2Z73 Chain:A ((29-334)) | ------------------------------------VPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKT---KSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAAS----KKMSHRRAFIMIIFVWLWSVLWAIGPIFG-WGAYTLE-------------GVLCNCSFDYISRDSTTRSNILCMFILGFFG----PILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKDAET |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -219667 for 2208 contacts (-99.5/contact) +
2D Compatibility (PS) -27628 + (NN) 4307 + (LL) 6024
1D Compatibility (HY) -13600 + (ID) 1750
Total energy: -252314.0 ( -114.27 by residue)
QMean score : 0.240
|
|
|