Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCESKIPNLQAQCSKFVQKPGPKIHPSEACCKAVKSVDMLCICKHIT-KEVENIISTEKVVYVARTCGLTLKPGTKCGSYTVPPSP
1N89 Chain:A ((7-65))
---------LAVCASAILSGA---KPSGECCGNLRAQQ-GCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP--------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19292 for 356 contacts (-54.2/contact) +
2D Compatibility (PS) -5837 + (NN) -180 + (LL) 360
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -27949.0 ( -78.51 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: