Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ICDISSGGIRSCQPAAAVRNPTDAPSAECCAALAGADL----------ACLCRYKSVGGMWVRFY-KIDVKRAMALPGKCGLTMPANC
1AFH Chain:A ((4-80))
-CGQVASAIAPCISYARGQGS--GPSAGCCSGVRSLNNAARTTADRRAACNC-LKNAA----AGVSGLNAGNAASIPSKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30365 for 478 contacts (-63.5/contact) +
2D Compatibility (PS) -6774 + (NN) -4663 + (LL) 784
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -44768.0 ( -93.66 by residue)
QMean score : 0.223
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: