Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYLICLKNLIREVIEGKVKEVVIDKGNKYYQVSKNTDKELLDGIMCKSKLKTKLLHSVK
2JVU Chain:A ((34-53))
-----------QGLNEGKVRGVSVS-GVFYYNDGTTSNFKGVVTPSTPVNTNQDINKTNK
General information:
TITO was launched using:
RESULT:
Template:
2JVU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -210 for 57 contacts (-3.7/contact) +
2D Compatibility (PS) -1972 + (NN) 1432 + (LL) 1260
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -1490.0 ( -26.14 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_2JVU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JVU-query.scw
PDB file :
Tito_Scwrl_2JVU.pdb
: