Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLITLTYNNFKQYAQQGTVPAVEQNNGSKVLQNSFYKSVYYINSVLWPIKGMLVGVKHDLNTSGITMGRREKVVWGTDAMIAILALQIYYLYSIQELHILCTCQKNYFHISKEQKARNLS
3HZQ Chain:A ((1-94))
-----MLKEFKEFALKGNV--LDLAIAVVMGAAFNKIICSLVENIIMPLIGKIFGSVDFAKEWSFWGIKYGLFIQSVIDFIIIAFALFIFVKIANTL--------------MKKE-----
General information:
TITO was launched using:
RESULT:
Template:
3HZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10586 for 453 contacts (-23.4/contact) +
2D Compatibility (PS) -9331 + (NN) 195 + (LL) 2268
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -23204.0 ( -51.22 by residue)
QMean score : 0.059
(partial model without unconserved sides chains):
PDB file :
Tito_3HZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HZQ-query.scw
PDB file :
Tito_Scwrl_3HZQ.pdb
: